BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030F08LP1|AL429256
(996 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig692 802 0.0
3x_Contig185 347 2e-95
>3x_Contig692
Length = 2077
Score = 802 bits (402), Expect = 0.0
Identities = 420/428 (98%), Gaps = 1/428 (0%)
Strand = Plus / Minus
Query: 569 tggaacaagcttacggtggtatgcgtggtatcaagggtcttgtttgggaaggttccgttt 628
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2074 tggaacaagctaacggtggtatgcgtggtatcaagggtcttgtttgggaaggttccgttt 2015
Query: 629 tggacccagaagaaggtattagattcagaggtcgtaccattccagawatccaaaaggaat 688
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2014 tggacccagaagaaggtattagattcagaggtcgtaccattccagatatccaaaaggaat 1955
Query: 689 tgccaaaggcagccgatggtgaagaaccattgccagaagctatcttttggttgcttttga 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1954 tgccaaaggcagccgatggtgaagaaccattgccagaagctatcttttggttgcttttga 1895
Query: 749 ccggtgaagttccaactgaaactcaagttaaggctttgtcagcagatttggcttctagat 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1894 ccggtgaagttccaactgaaactcaagttaaggctttgtcagcagatttggcttctagat 1835
Query: 809 ctgagttgccagcycatgttgagtctctattggataacttaccaaaggatttgcatccaa 868
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1834 ctgagttgccagctcatgttgagtctctattggataacttaccaaaggatttgcatccaa 1775
Query: 869 tggctcaattctcgatggcagthactgcatttggaatcagaatccaaatttgccaaggct 928
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 1774 tggctcaattctcgatggcagttactgca-ttggaatcagaatccaaatttgccaaggct 1716
Query: 929 tacgcycaaggtgtttctaagaaggattactgggactatacttttgaagattctttggrt 988
||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 1715 tacgctcaaggtgtttctaagaaggattactggaactatacttttgaagattctttggat 1656
Query: 989 ctattggg 996
||||||||
Sbjct: 1655 ctattggg 1648
>3x_Contig185
Length = 1072
Score = 347 bits (174), Expect = 2e-95
Identities = 178/180 (98%)
Strand = Plus / Plus
Query: 1 gatcattcatttttttccttcattgtttacgttattttgactgaggaaaacaactggctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gatcattcatttttttccttcattgtttacgttattttgactgaggaaaacaactggctc 480
Query: 61 aaaaatgagttacaagatcattcaaattcgttagtagtggtgataggtttcagtttattg 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaaaatgagtgacaagatcattcaaattcgttagtagtggtgataggtttcagtttattg 540
Query: 121 ttttgtaaaaaagagacttgtttcaattgaatataaaagggggcctgtmatttctttaaa 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 541 ttttgtaaaaaagagacttgtttcaattgaatataaaagggggcctgtaatttctttaaa 600
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,375
Number of Sequences: 1807
Number of extensions: 16375
Number of successful extensions: 357
Number of sequences better than 1.0e-20: 2
length of query: 996
length of database: 10,358,551
effective HSP length: 16
effective length of query: 980
effective length of database: 10,329,639
effective search space: 10123046220
effective search space used: 10123046220
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)